STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NH82_GASACTNF superfamily member 13b; Belongs to the tumor necrosis factor family. (156 aa)    
Predicted Functional Partners:
G3Q6H3_GASAC
TNF superfamily member 12; Belongs to the tumor necrosis factor family.
   
 0.862
G3PYU6_GASAC
CD40 ligand; Belongs to the tumor necrosis factor family.
   
 
 0.838
LOC100462700
CD40 molecule, TNF receptor superfamily member 5.
   
 0.802
G3P6Z9_GASAC
Uncharacterized protein.
   
 0.791
G3NK41_GASAC
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.779
TRAF5
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.779
G3PWU5_GASAC
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.752
il1b
Interleukin-1.
   
 0.739
G3NCY6_GASAC
Uncharacterized protein.
     
 0.710
G3NNR0_GASAC
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.707
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.