Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NH82_GASACTNF superfamily member 13b; Belongs to the tumor necrosis factor family. (156 aa)    
Predicted Functional Partners:
G3NG23_GASAC
Cystatin domain-containing protein.
    
 
 0.974
G3PWP8_GASAC
Akt interacting protein.
    
 
 0.970
G3Q6H3_GASAC
TNF superfamily member 12; Belongs to the tumor necrosis factor family.
    
 0.911
G3PYU6_GASAC
CD40 ligand; Belongs to the tumor necrosis factor family.
     
 0.873
G3NBT9_GASAC
Family with sequence similarity 160 member A2.
    
   0.813
G3PYF6_GASAC
Family with sequence similarity 160 member A1a.
    
   0.813
G3Q429_GASAC
Uncharacterized protein.
    
   0.813
LOC100462700
CD40 molecule, TNF receptor superfamily member 5.
    
 0.790
G3NK41_GASAC
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.782
TRAF5
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.782
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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