STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NH99_GASACPDZ domain containing 1. (520 aa)    
Predicted Functional Partners:
G3QA69_GASAC
A kinase (PRKA) anchor protein 10.
    
 
 0.911
G3N5Z1_GASAC
Sulfite oxidase.
   
 
  0.863
G3P2X0_GASAC
Cystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer.
   
 0.823
G3PTB5_GASAC
Intraflagellar transport 57 homolog (Chlamydomonas).
    
 0.778
G3NC32_GASAC
TNF receptor-associated factor 3 interacting protein 1.
    
 0.774
G3P714_GASAC
Uncharacterized protein.
    
 0.768
G3NRM4_GASAC
Intraflagellar transport 172.
    
 0.767
G3N915_GASAC
Intraflagellar transport 88 homolog.
    
 0.745
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.741
G3PL93_GASAC
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.741
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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