STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NHD1_GASACRAB3B, member RAS oncogene family. (217 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 0.972
G3QCN1_GASAC
Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.
    
 0.773
G3NGE1_GASAC
Synaptotagmin IIa.
   
 0.743
SYT2
Synaptotagmin 2.
   
 0.743
G3NZ60_GASAC
Uncharacterized protein.
   
 0.743
G3PIB9_GASAC
Synaptotagmin Ib.
   
 0.743
G3Q981_GASAC
Synaptotagmin Ia.
   
 0.743
G3NFK3_GASAC
Synaptotagmin XIb.
   
 0.739
G3PP66_GASAC
Uncharacterized protein.
   
 0.739
G3Q8Q3_GASAC
Synaptotagmin IV.
   
 0.739
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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