STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NHD7_GASACMON2 homolog, regulator of endosome-to-Golgi trafficking. (1740 aa)    
Predicted Functional Partners:
G3NHQ6_GASAC
DOP1 leucine zipper like protein B.
   
 
 0.954
G3NNA6_GASAC
DOP1 leucine zipper like protein A.
   
 
 0.954
G3NYJ4_GASAC
Uncharacterized protein.
    
 
 0.783
G3Q5V1_GASAC
ADP-ribosylation factor-like 1; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.783
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
   
 
 0.761
G3NDC8_GASAC
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
   
 
 0.742
ATP9A
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
   
 
 0.742
G3PCA0_GASAC
ADP-ribosylation factor related protein 1.
    
 
 0.733
G3P932_GASAC
VPS26, retromer complex component B.
 
 
 
 0.663
G3Q9U2_GASAC
Uncharacterized protein.
 
 
 
 0.660
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.