Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
G3NHD9_GASACMYCBP-associated, testis expressed 1. (543 aa)    
Predicted Functional Partners:
G3Q418_GASAC
Uncharacterized protein.
   
 
 0.952
G3PDQ1_GASAC
DUF4821 domain-containing protein.
   
 
 0.936
G3Q172_GASAC
WD_REPEATS_REGION domain-containing protein.
   
 0.924
G3NZG4_GASAC
WD repeat domain 66.
   
 
 0.922
G3P3V2_GASAC
Uncharacterized protein.
   
 
 0.915
G3P3X9_GASAC
Cilia and flagella associated protein 43.
   
 
 0.915
G3P6J0_GASAC
Radial spoke head 3.
   
 
 0.903
G3P356_GASAC
RIIa domain-containing protein.
    
 0.887
G3PU81_GASAC
Uncharacterized protein.
   
 0.881
G3NBC8_GASAC
Radial spoke head component 4A.
  
 
 0.879
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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