Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NHG7_GASACLeucine rich repeat containing 58b. (350 aa)    
Predicted Functional Partners:
G3NE47_GASAC
Elongin C paralog a; Belongs to the SKP1 family.
    
  0.908
G3NS39_GASAC
Cysteine dioxygenase.
    
   0.878
G3PJ15_GASAC
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
  0.835
CUL5
Cullin 5; Belongs to the cullin family.
    
  0.835
G3PCG6_GASAC
Ribosomal protein S27a.
    
  0.832
G3PMC3_GASAC
NEDD8 ubiquitin like modifier, like.
    
  0.831
G3NZ68_GASAC
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.830
G3NXK2_GASAC
Ring finger protein 7.
    
  0.829
G3NQD8_GASAC
RBR-type E3 ubiquitin transferase.
    
 
 0.780
G3QA52_GASAC
Ubiquitin B.
    
  0.729
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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