Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NHH8_GASACGATA binding protein 5. (377 aa)    
Predicted Functional Partners:
G3Q3B7_GASAC
NK2 homeobox 5.
   
 0.958
G3NLU4_GASAC
Zinc finger protein, FOG family member 2a.
    
 0.944
G3PGS2_GASAC
T-box transcription factor 20.
   
 0.860
G3NDE6_GASAC
Zinc finger protein, FOG family member 1.
   
 0.827
G3PBM4_GASAC
Mix paired-like homeobox.
    
 0.827
G3PL07_GASAC
T-cell acute lymphocytic leukemia 1.
   
 0.827
G3NK61_GASAC
SRY-box transcription factor 32.
    
 0.823
G3PVN5_GASAC
Heart and neural crest derivatives expressed 2.
   
 0.784
G3P624_GASAC
LIM domain only 2 (rhombotin-like 1).
    
 0.766
G3PSQ7_GASAC
LIM domain only 1.
    
 0.752
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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