STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NHI8_GASACMutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli). (746 aa)    
Predicted Functional Partners:
G3P4K3_GASAC
PMS1 homolog 2, mismatch repair system component.
  
 
0.999
G3NE68_GASAC
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.997
G3NP96_GASAC
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.997
G3NDQ4_GASAC
PMS1 homolog 1, mismatch repair system component.
  
 
0.996
G3NXP2_GASAC
MutL homolog 3 (E. coli).
    
0.996
G3NBZ1_GASAC
Exonuclease 1.
  
 0.992
G3NR70_GASAC
MutS homolog 3 (E. coli).
 
 0.988
G3P9V9_GASAC
BLM RecQ like helicase.
  
 0.988
G3NS19_GASAC
Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.
   
 0.985
G3PJZ5_GASAC
BRCA1 interacting protein C-terminal helicase 1.
   
 0.984
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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