Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NHJ2_GASACCP2 domain-containing protein. (610 aa)    
Predicted Functional Partners:
G3NQ08_GASAC
Homeobox domain-containing protein.
    
 
 0.796
G3NKQ0_GASAC
TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
   0.671
RING1
Ring finger protein 1.
    
 
 0.654
G3PNU5_GASAC
Ring finger protein 2.
    
 
 0.654
G3P151_GASAC
Thyroid hormone receptor interactor 13; Belongs to the AAA ATPase family.
   
   0.639
G3PD28_GASAC
Early endosome antigen 1.
   
   0.522
G3NGS8_GASAC
Si:dkey-90l8.3.
    
 
 0.483
G3NKD7_GASAC
LIM domain only 4b.
    
 
 0.483
G3Q3N1_GASAC
LIM domain only 4a.
    
 
 0.483
G3Q9W2_GASAC
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
      
 0.463
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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