STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NHJ2_GASACCP2 domain-containing protein. (610 aa)    
Predicted Functional Partners:
G3NQ08_GASAC
Homeobox domain-containing protein.
    
 
 0.542
G3NIQ2_GASAC
TATA box binding protein like 2.
   
  0.531
G3P6X8_GASAC
Uncharacterized protein.
    
  0.529
G3PUL7_GASAC
TATA box binding protein.
    
  0.529
G3NMK6_GASAC
RAB25, member RAS oncogene family a.
   
 
 0.522
RPL37A
Ribosomal protein L37a.
 
   
  0.512
G3NV94_GASAC
Paired box 1a.
   
  
 0.507
SMARCA5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
  0.504
G3Q3C0_GASAC
Protein kinase N3.
   
 
  0.498
G3P7P0_GASAC
Nucleolar protein 6.
   
 
  0.492
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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