STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NHL8_GASACZic family member 1 (odd-paired homolog, Drosophila). (440 aa)    
Predicted Functional Partners:
G3PC67_GASAC
Uncharacterized protein.
    
  0.848
G3PC70_GASAC
Uncharacterized protein.
    
  0.848
G3PC74_GASAC
Uncharacterized protein.
    
  0.848
G3Q623_GASAC
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
 0.816
G3Q9X3_GASAC
Receptor-interacting serine-threonine kinase 4.
    
 0.739
G3PC31_GASAC
V(D)J recombination-activating protein 1; Catalytic component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T-cell receptor genes in developing B and T- lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. In the RAG complex, RAG1 mediates the DNA-binding to the conserved recombination signal sequences (RSS) and catalyzes the DNA cleavage activities by introducing a double-strand break [...]
   
 0.709
G3NRQ7_GASAC
NME/NM23 family member 8; Belongs to the NDK family.
   
 0.645
G3NTB3_GASAC
Uncharacterized protein.
    
 0.638
G3NDU3_GASAC
Transcription factor AP-2 epsilon.
   
 
 0.633
G3NQ54_GASAC
T-box brain transcription factor 1b.
    
 
 0.632
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.