STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NHM0_GASACFibulin-1; Incorporated into fibronectin-containing matrix fibers. May play a role in cell adhesion and migration along protein fibers within the extracellular matrix (ECM). Could be important for certain developmental processes and contribute to the supramolecular organization of ECM architecture, in particular to those of basement membranes. (690 aa)    
Predicted Functional Partners:
G3N415_GASAC
LAG1_DNAbind domain-containing protein.
    
 0.728
G3PTN1_GASAC
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 0.728
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
 0.700
G3PH53_GASAC
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.655
NCSTN
Nicastrin.
    
 0.653
G3NZ98_GASAC
Matrix metallopeptidase 9.
   
 0.650
MFAP2
Microfibril associated protein 2.
   
 0.647
G3NIY0_GASAC
AT rich interactive domain 4A (RBP1-like).
    
 0.635
G3NK22_GASAC
Translocase of outer mitochondrial membrane 20.
    
 0.635
G3N9I3_GASAC
Myb-like, SWIRM and MPN domains 1.
    
 0.633
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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