Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
G3NHT8_GASACCopine family member IX. (562 aa)    
Predicted Functional Partners:
G3NDU0_GASAC
Neurochondrin.
   
  
 0.616
G3NEE6_GASAC
Ribonuclease H2, subunit B.
   
 
 0.603
G3PU55_GASAC
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
 
 0.546
G3NFY2_GASAC
SUMO-activating enzyme subunit 2; The heterodimer acts as an E1 ligase for SUMO1, SUMO2, SUMO3, and probably SUMO4. It mediates ATP-dependent activation of SUMO proteins followed by formation of a thioester bond between a SUMO protein and a conserved active site cysteine residue on UBA2/SAE2. Belongs to the ubiquitin-activating E1 family.
    
   0.517
G3NAS4_GASAC
E3 ubiquitin-protein ligase.
    
  0.498
G3NBZ9_GASAC
E3 ubiquitin-protein ligase.
    
  0.498
VAMP3
Vesicle associated membrane protein 3.
   
 
 0.486
G3NDH7_GASAC
Ras homolog family member Q.
    
 0.482
G3PUS8_GASAC
Ras homolog family member H.
    
 0.482
G3NYI5_GASAC
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
     
 0.478
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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