Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
G3NHX3_GASACProcollagen C-endopeptidase enhancer 2b. (411 aa)    
Predicted Functional Partners:
G3PA11_GASAC
Metalloendopeptidase.
   
 0.789
G3PXS0_GASAC
Metalloendopeptidase.
   
 0.789
G3PAA1_GASAC
Amnion associated transmembrane protein.
   
 0.785
COL22A1
Collagen type XXII alpha 1 chain.
    
 0.769
G3PY82_GASAC
Metalloendopeptidase.
   
 0.685
G3NME4_GASAC
Collagen triple helix repeat containing 1b.
    
 0.676
G3P3G3_GASAC
MET proto-oncogene, receptor tyrosine kinase.
    
 0.628
G3P8P8_GASAC
Macrophage stimulating 1 receptor a.
    
 0.628
G3PE85_GASAC
Macrophage stimulating 1 receptor b.
    
 0.628
G3ND52_GASAC
Collagen, type V, alpha 2a.
    
 0.555
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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