STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NHX3_GASACProcollagen C-endopeptidase enhancer 2b. (411 aa)    
Predicted Functional Partners:
G3PAA1_GASAC
Amnion associated transmembrane protein.
   
 0.877
G3P123_GASAC
Transcobalamin II.
    
 0.811
G3PA11_GASAC
Metalloendopeptidase.
    
0.745
G3PXS0_GASAC
Metalloendopeptidase.
    
0.745
G3P8P8_GASAC
Macrophage stimulating 1 receptor a.
   
 0.741
G3P3G3_GASAC
MET proto-oncogene, receptor tyrosine kinase.
    
 0.737
G3PE85_GASAC
Macrophage stimulating 1 receptor b.
    
 0.737
G3PY82_GASAC
Metalloendopeptidase.
    
0.715
G3NS40_GASAC
Collagen, type X, alpha 1b.
   
 0.684
G3NGM1_GASAC
Metalloendopeptidase.
   
 0.673
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.