Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NHY4_GASACUncharacterized protein. (409 aa)    
Predicted Functional Partners:
G3NRM9_GASAC
Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
 0.931
G3NZ15_GASAC
Thyroid hormone receptor beta.
  
  
 
0.923
G3NTJ0_GASAC
Uncharacterized protein.
  
  
 
0.900
G3Q9R0_GASAC
Nuclear receptor interacting protein 1b.
   
 0.893
G3QA56_GASAC
Uncharacterized protein.
    
 0.885
G3PFG0_GASAC
Nuclear receptor corepressor 2.
    
 0.884
G3N9U5_GASAC
Uncharacterized protein.
   
  0.795
G3N9V2_GASAC
Nuclear receptor coactivator 6.
   
  0.795
G3P107_GASAC
Mediator complex subunit 24.
    
  0.771
G3PCY4_GASAC
Aryl hydrocarbon receptor nuclear translocator.
    
 0.734
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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