Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NHY9_GASACPlexin b1a. (2123 aa)    
Predicted Functional Partners:
G3P3G3_GASAC
MET proto-oncogene, receptor tyrosine kinase.
    
 
0.842
G3NA91_GASAC
Neuropilin; Belongs to the neuropilin family.
    
 0.803
G3PN18_GASAC
Si:ch211-129c21.1; Belongs to the semaphorin family.
    
 0.787
G3PRI5_GASAC
Semaphorin 4e; Belongs to the semaphorin family.
    
 0.787
SEMA4D
Semaphorin 4D; Belongs to the semaphorin family.
    
 0.787
RND2
Rho family GTPase 2.
    
 0.774
G3P321_GASAC
Rho family GTPase 2.
    
 0.774
G3NDU4_GASAC
Sema domain-containing protein.
    
 0.747
RND1
Rho family GTPase 1.
    
 0.729
G3P142_GASAC
Rho family GTPase 1b.
    
 0.729
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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