Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SRFSerum response factor. (507 aa)    
Predicted Functional Partners:
MYOCD
Myocardin.
    
 0.969
G3N6X7_GASAC
ETS transcription factor ELK1.
    
 0.943
G3PA90_GASAC
ETS transcription factor ELK4.
    
 0.928
G3NMR8_GASAC
Myocardin related transcription factor Ab.
    
 0.912
G3P0I1_GASAC
Myocardin related transcription factor Aa.
    
 0.890
G3NKJ7_GASAC
Myocardin related transcription factor Ba.
    
 0.873
G3PLI8_GASAC
Myocardin related transcription factor Bb.
    
 0.873
G3N573_GASAC
Myogenin.
   
 
 0.872
G3PDG4_GASAC
CCAAT enhancer binding protein beta.
    
 
 0.856
G3P8C1_GASAC
V-fos FBJ murine osteosarcoma viral oncogene homolog Ab.
    
 0.834
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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