STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NI10_GASACKeratin 5; Belongs to the intermediate filament family. (481 aa)    
Predicted Functional Partners:
G3Q2W6_GASAC
Keratin 15; Belongs to the intermediate filament family.
  
0.794
G3PP67_GASAC
IF rod domain-containing protein; Belongs to the intermediate filament family.
  
0.768
G3Q2U5_GASAC
Keratin 98; Belongs to the intermediate filament family.
   
0.760
G3PP62_GASAC
IF rod domain-containing protein; Belongs to the intermediate filament family.
  
0.740
G3Q222_GASAC
Keratin 97; Belongs to the intermediate filament family.
  
0.731
G3NIM4_GASAC
Keratin 18a, tandem duplicate 1; Belongs to the intermediate filament family.
  
0.714
G3NC49_GASAC
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.708
G3PCG6_GASAC
Ribosomal protein S27a.
   
  0.707
G3NGE0_GASAC
BCL2 associated athanogene 3.
    
 
 0.702
G3PXF6_GASAC
Mothers against decapentaplegic homolog.
   
 0.702
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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