STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NI25_GASACF-box and WD repeat domain containing 4. (405 aa)    
Predicted Functional Partners:
G3NPM0_GASAC
Cullin 1b; Belongs to the cullin family.
    
 0.934
G3QCJ8_GASAC
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.911
G3NY10_GASAC
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
  0.808
CUL3
Cullin 3; Belongs to the cullin family.
    
  0.808
G3NDS8_GASAC
Chaperonin containing TCP1, subunit 5 (epsilon).
    
 0.785
G3NGJ5_GASAC
CDK2 associated cullin domain 1; Belongs to the cullin family.
    
  0.779
G3NER3_GASAC
Thioredoxin domain containing 9.
    
   0.768
G3Q882_GASAC
T-complex protein 1 subunit delta.
    
 0.756
G3P7I0_GASAC
T-complex protein 1 subunit gamma.
    
 0.750
G3Q8L9_GASAC
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
    
 0.721
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.