G3NI51_GASAC protein (Gasterosteus aculeatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

G3NI51_GASAC

Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (214 aa)

Predicted Functional Partners:

G3NGP8_GASAC

0.973

FGFR1

0.973

G3QC84_GASAC

0.967

G3NKX2_GASAC

0.965

G3PS83_GASAC

0.961

G3Q1P0_GASAC

0.913

G3PVP5_GASAC

0.909

G3NFC6_GASAC

0.903

G3PMK6_GASAC

0.903

FGFRL1

0.901

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FGFR1	G3NFC6_GASAC	ENSGACP00000016410	ENSGACP00000004028	Fibroblast growth factor receptor.	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	0.599
FGFR1	G3NI51_GASAC	ENSGACP00000016410	ENSGACP00000005011	Fibroblast growth factor receptor.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.973
FGFR1	G3PMK6_GASAC	ENSGACP00000016410	ENSGACP00000018837	Fibroblast growth factor receptor.	Platelet-derived growth factor receptor, alpha polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	0.654
FGFR1	G3PS83_GASAC	ENSGACP00000016410	ENSGACP00000020469	Fibroblast growth factor receptor.	Fibroblast growth factor receptor.	0.843
FGFR1	G3Q1P0_GASAC	ENSGACP00000016410	ENSGACP00000023788	Fibroblast growth factor receptor.	Platelet-derived growth factor receptor, beta polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	0.650
FGFRL1	G3NFC6_GASAC	ENSGACP00000010953	ENSGACP00000004028	Fibroblast growth factor receptor like 1.	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	0.587
FGFRL1	G3NI51_GASAC	ENSGACP00000010953	ENSGACP00000005011	Fibroblast growth factor receptor like 1.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.901
FGFRL1	G3PMK6_GASAC	ENSGACP00000010953	ENSGACP00000018837	Fibroblast growth factor receptor like 1.	Platelet-derived growth factor receptor, alpha polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	0.599
FGFRL1	G3Q1P0_GASAC	ENSGACP00000010953	ENSGACP00000023788	Fibroblast growth factor receptor like 1.	Platelet-derived growth factor receptor, beta polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	0.636
G3NFC6_GASAC	FGFR1	ENSGACP00000004028	ENSGACP00000016410	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	Fibroblast growth factor receptor.	0.599
G3NFC6_GASAC	FGFRL1	ENSGACP00000004028	ENSGACP00000010953	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	Fibroblast growth factor receptor like 1.	0.587
G3NFC6_GASAC	G3NGP8_GASAC	ENSGACP00000004028	ENSGACP00000004504	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	Fibroblast growth factor receptor.	0.591
G3NFC6_GASAC	G3NI51_GASAC	ENSGACP00000004028	ENSGACP00000005011	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.903
G3NFC6_GASAC	G3NKX2_GASAC	ENSGACP00000004028	ENSGACP00000005985	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	Fibroblast growth factor receptor.	0.591
G3NFC6_GASAC	G3PMK6_GASAC	ENSGACP00000004028	ENSGACP00000018837	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	Platelet-derived growth factor receptor, alpha polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	0.522
G3NFC6_GASAC	G3PS83_GASAC	ENSGACP00000004028	ENSGACP00000020469	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	Fibroblast growth factor receptor.	0.596
G3NFC6_GASAC	G3PVP5_GASAC	ENSGACP00000004028	ENSGACP00000021684	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	Fibroblast growth factor receptor like 1a.	0.587
G3NFC6_GASAC	G3Q1P0_GASAC	ENSGACP00000004028	ENSGACP00000023788	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	Platelet-derived growth factor receptor, beta polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	0.785
G3NFC6_GASAC	G3QC84_GASAC	ENSGACP00000004028	ENSGACP00000027500	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	Fibroblast growth factor receptor.	0.601
G3NGP8_GASAC	G3NFC6_GASAC	ENSGACP00000004504	ENSGACP00000004028	Fibroblast growth factor receptor.	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	0.591