STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NI53_GASACDENN/MADD domain containing 6Aa. (623 aa)    
Predicted Functional Partners:
G3QCN1_GASAC
Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.
   
 
  0.681
G3N7X1_GASAC
Uncharacterized protein.
     
 0.677
G3PX38_GASAC
Uncharacterized protein.
     
 0.677
G3Q6S8_GASAC
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 
  0.656
G3NFR8_GASAC
DENN domain containing 10.
      
 0.525
G3NPS4_GASAC
AVL9 homolog (S. cerevisiase).
      
 0.521
G3P728_GASAC
Ribosomal protein S6 kinase polypeptide 1.
    
   0.482
G3Q883_GASAC
Sorting nexin 15.
    
   0.482
G3P1Y2_GASAC
Spliceosome associated factor 3, U4/U6 recycling protein.
      
 0.436
G3PKF0_GASAC
DENN domain containing 11.
      
 0.412
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (28%) [HD]