STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NIC4_GASACDehydrogenase/reductase (SDR family) member 13a, tandem duplicate 2; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (279 aa)    
Predicted Functional Partners:
G3P608_GASAC
Alanyl-tRNA synthetase domain containing 1.
  
 0.796
G3PM80_GASAC
Cytochrome b5 reductase 4.
  
 0.795
G3PR09_GASAC
Patatin-like phospholipase domain containing 4.
     
 0.791
G3Q8M4_GASAC
Malonyl CoA:ACP acyltransferase (mitochondrial).
  
 0.769
FDX1
Ferredoxin 1.
  
 0.765
G3Q784_GASAC
Ferredoxin 2.
  
 0.765
G3NZ83_GASAC
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.760
G3PLR3_GASAC
Aldehyde dehydrogenase 1 family, member A3; Belongs to the aldehyde dehydrogenase family.
  
 0.696
G3PTF3_GASAC
Aldehyde dehydrogenase 1 family, member A2; Belongs to the aldehyde dehydrogenase family.
  
 0.696
G3NRZ9_GASAC
Ig_4 domain-containing protein.
   
 0.676
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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