G3NID1_GASAC protein (Gasterosteus aculeatus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

G3NID1_GASAC

Uncharacterized protein. (200 aa)

Predicted Functional Partners:

G3Q5Z9_GASAC

0.998

G3P9G6_GASAC

0.997

G3PCK2_GASAC

0.996

G3Q7V9_GASAC

0.992

G3Q7W2_GASAC

0.989

G3QBE4_GASAC

0.988

G3NJH3_GASAC

0.928

G3PXQ0_GASAC

0.895

G3Q944_GASAC

0.843

G3PGT8_GASAC

0.716

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3NID1_GASAC	G3NJH3_GASAC	ENSGACP00000005091	ENSGACP00000005484	Uncharacterized protein.	RNA binding motif protein 42.	0.928
G3NID1_GASAC	G3P9G6_GASAC	ENSGACP00000005091	ENSGACP00000014240	Uncharacterized protein.	HAUS augmin-like complex, subunit 5.	0.997
G3NID1_GASAC	G3PCK2_GASAC	ENSGACP00000005091	ENSGACP00000015326	Uncharacterized protein.	Uncharacterized protein.	0.996
G3NID1_GASAC	G3PGT8_GASAC	ENSGACP00000005091	ENSGACP00000016813	Uncharacterized protein.	Ring finger protein 10.	0.716
G3NID1_GASAC	G3PXQ0_GASAC	ENSGACP00000005091	ENSGACP00000022389	Uncharacterized protein.	Pericentriolar material 1.	0.895
G3NID1_GASAC	G3Q5Z9_GASAC	ENSGACP00000005091	ENSGACP00000025305	Uncharacterized protein.	HAUS augmin-like complex, subunit 3.	0.998
G3NID1_GASAC	G3Q7V9_GASAC	ENSGACP00000005091	ENSGACP00000025973	Uncharacterized protein.	Uncharacterized protein.	0.992
G3NID1_GASAC	G3Q7W2_GASAC	ENSGACP00000005091	ENSGACP00000025976	Uncharacterized protein.	HAUS6_N domain-containing protein.	0.989
G3NID1_GASAC	G3Q944_GASAC	ENSGACP00000005091	ENSGACP00000026408	Uncharacterized protein.	HAUS augmin-like complex, subunit 4.	0.843
G3NID1_GASAC	G3QBE4_GASAC	ENSGACP00000005091	ENSGACP00000027210	Uncharacterized protein.	HAUS augmin-like complex, subunit 1.	0.988
G3NJH3_GASAC	G3NID1_GASAC	ENSGACP00000005484	ENSGACP00000005091	RNA binding motif protein 42.	Uncharacterized protein.	0.928
G3NJH3_GASAC	G3PCK2_GASAC	ENSGACP00000005484	ENSGACP00000015326	RNA binding motif protein 42.	Uncharacterized protein.	0.964
G3NJH3_GASAC	G3PXQ0_GASAC	ENSGACP00000005484	ENSGACP00000022389	RNA binding motif protein 42.	Pericentriolar material 1.	0.627
G3NJH3_GASAC	G3Q5Z9_GASAC	ENSGACP00000005484	ENSGACP00000025305	RNA binding motif protein 42.	HAUS augmin-like complex, subunit 3.	0.967
G3NJH3_GASAC	G3Q7V9_GASAC	ENSGACP00000005484	ENSGACP00000025973	RNA binding motif protein 42.	Uncharacterized protein.	0.940
G3NJH3_GASAC	G3Q7W2_GASAC	ENSGACP00000005484	ENSGACP00000025976	RNA binding motif protein 42.	HAUS6_N domain-containing protein.	0.940
G3NJH3_GASAC	G3Q944_GASAC	ENSGACP00000005484	ENSGACP00000026408	RNA binding motif protein 42.	HAUS augmin-like complex, subunit 4.	0.918
G3NJH3_GASAC	G3QBE4_GASAC	ENSGACP00000005484	ENSGACP00000027210	RNA binding motif protein 42.	HAUS augmin-like complex, subunit 1.	0.952
G3P9G6_GASAC	G3NID1_GASAC	ENSGACP00000014240	ENSGACP00000005091	HAUS augmin-like complex, subunit 5.	Uncharacterized protein.	0.997
G3P9G6_GASAC	G3PCK2_GASAC	ENSGACP00000014240	ENSGACP00000015326	HAUS augmin-like complex, subunit 5.	Uncharacterized protein.	0.999