G3NIF1_GASAC protein (Gasterosteus aculeatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3NI50_GASAC	G3NIF1_GASAC	ENSGACP00000005010	ENSGACP00000005111	Ubiquitin-like modifier activating enzyme 5.	CDK5 regulatory subunit associated protein 3.	0.806
G3NI50_GASAC	G3NSM7_GASAC	ENSGACP00000005010	ENSGACP00000008345	Ubiquitin-like modifier activating enzyme 5.	UFM1-specific ligase 1.	0.911
G3NI50_GASAC	G3P657_GASAC	ENSGACP00000005010	ENSGACP00000013080	Ubiquitin-like modifier activating enzyme 5.	SRP receptor subunit beta.	0.472
G3NI50_GASAC	G3PRF3_GASAC	ENSGACP00000005010	ENSGACP00000020188	Ubiquitin-like modifier activating enzyme 5.	Uncharacterized protein.	0.675
G3NI50_GASAC	G3PS52_GASAC	ENSGACP00000005010	ENSGACP00000020438	Ubiquitin-like modifier activating enzyme 5.	Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage.	0.997
G3NI50_GASAC	G3Q3C4_GASAC	ENSGACP00000005010	ENSGACP00000024376	Ubiquitin-like modifier activating enzyme 5.	Ribosomal protein L26.	0.573
G3NI50_GASAC	LTN1	ENSGACP00000005010	ENSGACP00000027251	Ubiquitin-like modifier activating enzyme 5.	Listerin E3 ubiquitin protein ligase 1.	0.717
G3NIF1_GASAC	G3NI50_GASAC	ENSGACP00000005111	ENSGACP00000005010	CDK5 regulatory subunit associated protein 3.	Ubiquitin-like modifier activating enzyme 5.	0.806
G3NIF1_GASAC	G3NSM7_GASAC	ENSGACP00000005111	ENSGACP00000008345	CDK5 regulatory subunit associated protein 3.	UFM1-specific ligase 1.	0.997
G3NIF1_GASAC	G3P023_GASAC	ENSGACP00000005111	ENSGACP00000010946	CDK5 regulatory subunit associated protein 3.	FA complementation group E.	0.820
G3NIF1_GASAC	G3P657_GASAC	ENSGACP00000005111	ENSGACP00000013080	CDK5 regulatory subunit associated protein 3.	SRP receptor subunit beta.	0.826
G3NIF1_GASAC	G3PIA4_GASAC	ENSGACP00000005111	ENSGACP00000017331	CDK5 regulatory subunit associated protein 3.	Peptidylprolyl isomerase.	0.974
G3NIF1_GASAC	G3PRF3_GASAC	ENSGACP00000005111	ENSGACP00000020188	CDK5 regulatory subunit associated protein 3.	Uncharacterized protein.	0.990
G3NIF1_GASAC	G3PS52_GASAC	ENSGACP00000005111	ENSGACP00000020438	CDK5 regulatory subunit associated protein 3.	Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage.	0.975
G3NIF1_GASAC	G3Q004_GASAC	ENSGACP00000005111	ENSGACP00000023194	CDK5 regulatory subunit associated protein 3.	Cyclin-dependent kinase inhibitor 2A/B (p15, inhibits CDK4).	0.836
G3NIF1_GASAC	G3Q3C4_GASAC	ENSGACP00000005111	ENSGACP00000024376	CDK5 regulatory subunit associated protein 3.	Ribosomal protein L26.	0.797
G3NIF1_GASAC	LTN1	ENSGACP00000005111	ENSGACP00000027251	CDK5 regulatory subunit associated protein 3.	Listerin E3 ubiquitin protein ligase 1.	0.875
G3NSM7_GASAC	G3NI50_GASAC	ENSGACP00000008345	ENSGACP00000005010	UFM1-specific ligase 1.	Ubiquitin-like modifier activating enzyme 5.	0.911
G3NSM7_GASAC	G3NIF1_GASAC	ENSGACP00000008345	ENSGACP00000005111	UFM1-specific ligase 1.	CDK5 regulatory subunit associated protein 3.	0.997
G3NSM7_GASAC	G3P023_GASAC	ENSGACP00000008345	ENSGACP00000010946	UFM1-specific ligase 1.	FA complementation group E.	0.854