STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NIG0_GASACCalcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling. (188 aa)    
Predicted Functional Partners:
G3PKJ7_GASAC
Coiled-coil domain containing 47.
    
 
 0.952
G3NRC4_GASAC
Transmembrane protein 147.
   
 
 0.939
G3P8N3_GASAC
Nicalin.
   
 
 0.938
G3N4X0_GASAC
Phenylalanyl-tRNA synthetase subunit beta.
 
      0.898
G3P1R1_GASAC
Nicalin; May antagonize Nodal signaling and subsequent organization of axial structures during mesodermal patterning.
   
 
 0.872
G3P2T7_GASAC
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
   
   0.864
G3N8S7_GASAC
RAB5 interacting factor.
   
 
 0.857
G3NVH0_GASAC
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
   0.837
G3N5P1_GASAC
Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
    
   0.834
G3N640_GASAC
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
    
   0.834
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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