STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NIH5_GASACLimb development membrane protein 1; Belongs to the LIMR family. (489 aa)    
Predicted Functional Partners:
G3NIG1_GASAC
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
 
   
 0.591
G3NST5_GASAC
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
 
   
 0.561
G3PSE1_GASAC
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
 
   
 0.561
G3P2Y8_GASAC
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
 
   
 0.555
G3NNN8_GASAC
Low density lipoprotein receptor-related protein 2a.
    
  0.548
G3NUV7_GASAC
Low density lipoprotein receptor-related protein 2b.
    
  0.548
G3PJ16_GASAC
EGF-like domain-containing protein.
    
  0.548
G3PJ24_GASAC
EGF-like domain-containing protein.
    
  0.548
G3PYA2_GASAC
Low density lipoprotein receptor-related protein 4.
    
  0.548
G3Q0M1_GASAC
Uncharacterized protein.
    
  0.548
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.