Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NIH6_GASACDUF4801 domain-containing protein. (1047 aa)    
Predicted Functional Partners:
G3PE09_GASAC
THAP-type domain-containing protein.
    
 0.932
MAX
MYC associated factor X.
    
 0.911
G3NYE1_GASAC
Myc associated factor X.
    
 0.911
G3NM10_GASAC
L3MBTL histone methyl-lysine binding protein 2.
   
 0.880
G3PR84_GASAC
Mbt domain containing 1.
   
 0.880
G3NE85_GASAC
Polycomb group ring finger 6.
    
 0.842
G3PWQ2_GASAC
Polycomb group ring finger 1.
    
 0.842
RING1
Ring finger protein 1.
    
  0.814
G3PNU5_GASAC
Ring finger protein 2.
    
  0.814
YAF2
YY1 associated factor 2.
    
 0.787
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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