STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBX1Chromobox homolog 1b (HP1 beta homolog Drosophila). (204 aa)    
Predicted Functional Partners:
G3PH31_GASAC
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
   
0.933
G3PE09_GASAC
THAP-type domain-containing protein.
   
 0.858
G3NM10_GASAC
L3MBTL histone methyl-lysine binding protein 2.
    
 0.847
G3PR84_GASAC
Mbt domain containing 1.
    
 0.847
G3NEW1_GASAC
Euchromatic histone-lysine N-methyltransferase 2.
   
 0.832
G3NGE2_GASAC
Euchromatic histone-lysine N-methyltransferase 1a.
    
 0.832
G3Q1W8_GASAC
Euchromatic histone-lysine N-methyltransferase 1b.
    
 0.832
G3NE85_GASAC
Polycomb group ring finger 6.
    
 0.801
G3PWQ2_GASAC
Polycomb group ring finger 1.
    
 0.801
G3PDT8_GASAC
SET domain and mariner transposase fusion gene.
    
 0.778
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.