Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
G3NII5_GASACSUB1 regulator of transcription a. (133 aa)    
Predicted Functional Partners:
G3NE42_GASAC
Symplekin.
    
 
 0.904
G3PSY4_GASAC
General transcription factor IIB.
    
 
 0.899
G3NMH3_GASAC
Transcription elongation factor SPT5.
    
 
 0.877
G3NH63_GASAC
Uncharacterized protein.
   
  
 0.845
G3NC28_GASAC
Polymerase (RNA) II (DNA directed) polypeptide C.
   
 
 0.825
GTF3C1
General transcription factor IIIC subunit 1.
    
 
 0.798
G3NLH4_GASAC
Ubiquitin protein ligase E3 component n-recognin 5.
    
   0.781
G3NU10_GASAC
Sp1 transcription factor.
    
   0.781
G3NQE2_GASAC
Pumilio RNA-binding family member 1.
    
   0.764
G3P589_GASAC
Pumilio RNA-binding family member 2.
    
   0.764
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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