STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NIJ5_GASACUncharacterized protein. (264 aa)    
Predicted Functional Partners:
G3P5C3_GASAC
Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family.
   
 0.943
G3NIJ8_GASAC
Uncharacterized protein.
 
 
    0.900
G3NTR8_GASAC
Si:ch211-263k4.2.
    
 0.889
G3NWB3_GASAC
Uncharacterized protein.
    
 0.889
G3PC67_GASAC
Uncharacterized protein.
   
  0.852
G3PC70_GASAC
Uncharacterized protein.
   
  0.849
G3PC74_GASAC
Uncharacterized protein.
    
  0.848
KDM1B
Lysine demethylase 1B.
    
  0.835
G3NRQ7_GASAC
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.644
G3NTB3_GASAC
Uncharacterized protein.
    
 0.638
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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