G3NIK6_GASAC protein (Gasterosteus aculeatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

G3NIK6_GASAC

Mitogen-activated protein kinase binding protein 1. (1495 aa)

Predicted Functional Partners:

G3Q1Y1_GASAC

0.791

G3NQF0_GASAC

0.614

G3NVN6_GASAC

0.614

G3PVL6_GASAC

0.614

G3NHV9_GASAC

0.562

G3NSP6_GASAC

0.560

G3P8X8_GASAC

0.560

G3PKP5_GASAC

0.560

G3Q6A5_GASAC

0.560

G3N8V9_GASAC

0.551

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3N8V9_GASAC	G3NHV9_GASAC	ENSGACP00000001746	ENSGACP00000004919	Tcp10_C domain-containing protein.	Centrosomal protein 63.	0.900
G3N8V9_GASAC	G3NIK6_GASAC	ENSGACP00000001746	ENSGACP00000005166	Tcp10_C domain-containing protein.	Mitogen-activated protein kinase binding protein 1.	0.551
G3NHV9_GASAC	G3N8V9_GASAC	ENSGACP00000004919	ENSGACP00000001746	Centrosomal protein 63.	Tcp10_C domain-containing protein.	0.900
G3NHV9_GASAC	G3NIK6_GASAC	ENSGACP00000004919	ENSGACP00000005166	Centrosomal protein 63.	Mitogen-activated protein kinase binding protein 1.	0.562
G3NHV9_GASAC	G3NSP6_GASAC	ENSGACP00000004919	ENSGACP00000008364	Centrosomal protein 63.	Centrosomal protein 170B.	0.444
G3NHV9_GASAC	G3P8X8_GASAC	ENSGACP00000004919	ENSGACP00000014052	Centrosomal protein 63.	Centrosomal protein 170Aa.	0.444
G3NHV9_GASAC	G3PKP5_GASAC	ENSGACP00000004919	ENSGACP00000018175	Centrosomal protein 63.	Uncharacterized protein.	0.444
G3NHV9_GASAC	G3Q6A5_GASAC	ENSGACP00000004919	ENSGACP00000025413	Centrosomal protein 63.	Centrosomal protein 170Ab.	0.444
G3NIK6_GASAC	G3N8V9_GASAC	ENSGACP00000005166	ENSGACP00000001746	Mitogen-activated protein kinase binding protein 1.	Tcp10_C domain-containing protein.	0.551
G3NIK6_GASAC	G3NHV9_GASAC	ENSGACP00000005166	ENSGACP00000004919	Mitogen-activated protein kinase binding protein 1.	Centrosomal protein 63.	0.562
G3NIK6_GASAC	G3NQF0_GASAC	ENSGACP00000005166	ENSGACP00000007566	Mitogen-activated protein kinase binding protein 1.	Mitogen-activated protein kinase.	0.614
G3NIK6_GASAC	G3NSP6_GASAC	ENSGACP00000005166	ENSGACP00000008364	Mitogen-activated protein kinase binding protein 1.	Centrosomal protein 170B.	0.560
G3NIK6_GASAC	G3NVN6_GASAC	ENSGACP00000005166	ENSGACP00000009405	Mitogen-activated protein kinase binding protein 1.	Mitogen-activated protein kinase.	0.614
G3NIK6_GASAC	G3P8X8_GASAC	ENSGACP00000005166	ENSGACP00000014052	Mitogen-activated protein kinase binding protein 1.	Centrosomal protein 170Aa.	0.560
G3NIK6_GASAC	G3PKP5_GASAC	ENSGACP00000005166	ENSGACP00000018175	Mitogen-activated protein kinase binding protein 1.	Uncharacterized protein.	0.560
G3NIK6_GASAC	G3PVL6_GASAC	ENSGACP00000005166	ENSGACP00000021655	Mitogen-activated protein kinase binding protein 1.	Mitogen-activated protein kinase.	0.614
G3NIK6_GASAC	G3Q1Y1_GASAC	ENSGACP00000005166	ENSGACP00000023880	Mitogen-activated protein kinase binding protein 1.	Mitogen-activated protein kinase.	0.791
G3NIK6_GASAC	G3Q6A5_GASAC	ENSGACP00000005166	ENSGACP00000025413	Mitogen-activated protein kinase binding protein 1.	Centrosomal protein 170Ab.	0.560
G3NQF0_GASAC	G3NIK6_GASAC	ENSGACP00000007566	ENSGACP00000005166	Mitogen-activated protein kinase.	Mitogen-activated protein kinase binding protein 1.	0.614
G3NQF0_GASAC	G3Q1Y1_GASAC	ENSGACP00000007566	ENSGACP00000023880	Mitogen-activated protein kinase.	Mitogen-activated protein kinase.	0.986