G3NIL5_GASAC protein (Gasterosteus aculeatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3NFT6_GASAC	G3NIL5_GASAC	ENSGACP00000004191	ENSGACP00000005175	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Mix-type homeobox gene 1.	0.641
G3NFT6_GASAC	G3NIV4_GASAC	ENSGACP00000004191	ENSGACP00000005264	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Translocase of inner mitochondrial membrane 9 homolog.	0.970
G3NFT6_GASAC	G3PRH6_GASAC	ENSGACP00000004191	ENSGACP00000020211	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Cactin.	0.950
G3NFT6_GASAC	G3Q3E1_GASAC	ENSGACP00000004191	ENSGACP00000024393	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Translocase of inner mitochondrial membrane 10 homolog (yeast).	0.946
G3NFT6_GASAC	TIMM22	ENSGACP00000004191	ENSGACP00000026777	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Translocase of inner mitochondrial membrane 22.	0.970
G3NIL5_GASAC	G3NFT6_GASAC	ENSGACP00000005175	ENSGACP00000004191	Mix-type homeobox gene 1.	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.641
G3NIL5_GASAC	G3NIV4_GASAC	ENSGACP00000005175	ENSGACP00000005264	Mix-type homeobox gene 1.	Translocase of inner mitochondrial membrane 9 homolog.	0.687
G3NIL5_GASAC	G3NM42_GASAC	ENSGACP00000005175	ENSGACP00000006405	Mix-type homeobox gene 1.	E1A binding protein p300 a.	0.620
G3NIL5_GASAC	G3NY16_GASAC	ENSGACP00000005175	ENSGACP00000010236	Mix-type homeobox gene 1.	E1A binding protein p300 b.	0.620
G3NIL5_GASAC	G3P1E2_GASAC	ENSGACP00000005175	ENSGACP00000011415	Mix-type homeobox gene 1.	Ets variant 5a.	0.676
G3NIL5_GASAC	G3PH45_GASAC	ENSGACP00000005175	ENSGACP00000016920	Mix-type homeobox gene 1.	Ets variant 1.	0.620
G3NIL5_GASAC	G3PRH6_GASAC	ENSGACP00000005175	ENSGACP00000020211	Mix-type homeobox gene 1.	Cactin.	0.731
G3NIL5_GASAC	G3PXH8_GASAC	ENSGACP00000005175	ENSGACP00000022317	Mix-type homeobox gene 1.	FSHD region gene 1.	0.636
G3NIL5_GASAC	G3Q3E1_GASAC	ENSGACP00000005175	ENSGACP00000024393	Mix-type homeobox gene 1.	Translocase of inner mitochondrial membrane 10 homolog (yeast).	0.717
G3NIL5_GASAC	TIMM22	ENSGACP00000005175	ENSGACP00000026777	Mix-type homeobox gene 1.	Translocase of inner mitochondrial membrane 22.	0.858
G3NIV4_GASAC	G3NFT6_GASAC	ENSGACP00000005264	ENSGACP00000004191	Translocase of inner mitochondrial membrane 9 homolog.	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.970
G3NIV4_GASAC	G3NIL5_GASAC	ENSGACP00000005264	ENSGACP00000005175	Translocase of inner mitochondrial membrane 9 homolog.	Mix-type homeobox gene 1.	0.687
G3NIV4_GASAC	G3PRH6_GASAC	ENSGACP00000005264	ENSGACP00000020211	Translocase of inner mitochondrial membrane 9 homolog.	Cactin.	0.928
G3NIV4_GASAC	G3Q3E1_GASAC	ENSGACP00000005264	ENSGACP00000024393	Translocase of inner mitochondrial membrane 9 homolog.	Translocase of inner mitochondrial membrane 10 homolog (yeast).	0.999
G3NIV4_GASAC	TIMM22	ENSGACP00000005264	ENSGACP00000026777	Translocase of inner mitochondrial membrane 9 homolog.	Translocase of inner mitochondrial membrane 22.	0.985