STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NIN5_GASACAmino acid transporter. (529 aa)    
Predicted Functional Partners:
G3NDH7_GASAC
Ras homolog family member Q.
    
 0.595
G3PUS8_GASAC
Ras homolog family member H.
    
 0.595
G3P697_GASAC
Aldehyde dehydrogenase 7 family, member A1; Belongs to the aldehyde dehydrogenase family.
  
 
 0.593
G3PX59_GASAC
Transmembrane protein 59.
   
  0.591
VAMP3
Vesicle associated membrane protein 3.
    
 0.590
G3PRI7_GASAC
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
 0.582
G3NA54_GASAC
Rac family small GTPase 2.
    
  0.561
G3P4S1_GASAC
Uncharacterized protein.
    
  0.561
G3PCP9_GASAC
Rac family small GTPase 1b.
    
  0.561
G3PRQ9_GASAC
Rac family small GTPase 3b.
    
  0.561
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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