STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NIR3_GASACVacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (258 aa)    
Predicted Functional Partners:
G3NGS7_GASAC
Vacuolar protein sorting 25 homolog.
   
 0.999
G3QBH1_GASAC
Vacuolar protein sorting 36 homolog.
   
 0.999
G3P9W1_GASAC
Charged multivesicular body protein 6a.
    
 0.979
G3PMY4_GASAC
Charged multivesicular body protein 6.
    
 0.979
G3NNZ5_GASAC
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.966
G3PFF6_GASAC
Zgc:153240.
    
 0.962
G3NIW2_GASAC
Charged multivesicular body protein 2A.
   
 0.943
G3NC98_GASAC
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
    
 0.937
G3NHL1_GASAC
Uncharacterized protein.
   
 0.927
G3NIX4_GASAC
Charged multivesicular body protein 4C.
    
 0.927
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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