Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NIS7_GASACUncharacterized protein. (1132 aa)    
Predicted Functional Partners:
G3PHA6_GASAC
Piwi-like RNA-mediated gene silencing 2.
   
 0.865
G3PF03_GASAC
Piwi-like RNA-mediated gene silencing 1; Belongs to the argonaute family.
   
 0.857
G3Q753_GASAC
Phospholipase D family, member 6.
    
 
 0.799
G3NKF9_GASAC
Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family.
    
   0.781
G3NTP9_GASAC
Tudor domain containing 1.
   
 0.773
G3PRQ7_GASAC
Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family.
    
   0.756
UPF1
UPF1 RNA helicase and ATPase.
   
 
 0.739
G3PS70_GASAC
Uncharacterized protein.
   
 
 0.739
G3PIA4_GASAC
Peptidylprolyl isomerase.
   
 0.720
G3N8I7_GASAC
Uncharacterized protein.
   
 0.718
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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