Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NIT9_GASACHomeobox domain-containing protein. (191 aa)    
Predicted Functional Partners:
G3PWN7_GASAC
Iroquois homeobox 3a.
    
 
 0.716
G3NMT2_GASAC
PR domain containing 13.
    
 
 0.623
G3NBU3_GASAC
Oligodendrocyte lineage transcription factor 2.
   
  
 0.558
G3Q3P2_GASAC
Zinc finger, C4H2 domain containing.
      
 0.549
G3NQT9_GASAC
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
  0.542
G3PK56_GASAC
LIM homeobox 1a.
    
 
 0.482
G3QAB4_GASAC
LIM homeobox 1b.
    
 
 0.482
G3P7F8_GASAC
Ring finger protein 220b.
    
 
 0.460
G3PNA8_GASAC
Ring finger protein 220a.
    
 
 0.460
G3P1E7_GASAC
FEZ family zinc finger 1.
   
 
 0.444
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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