Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
G3NIU3_GASACUncharacterized protein. (148 aa)    
Predicted Functional Partners:
G3NIT5_GASAC
MAM and LDL receptor class A domain containing 1.
 
      0.865
CBWD1
COBW domain containing 1.
    
 
 0.587
G3PFY0_GASAC
RAB, member of RAS oncogene family-like 2.
    
 0.519
G3PX11_GASAC
Vav 3 guanine nucleotide exchange factor b.
    
 0.512
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.493
G3NPM2_GASAC
P53-induced death domain protein 1.
    
  0.488
G3Q623_GASAC
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
  0.480
G3Q5X2_GASAC
Si:dkeyp-75h12.2.
    
 0.477
G3QBX6_GASAC
RAD50 homolog, double strand break repair protein.
    
 0.475
G3P3Z7_GASAC
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
  0.461
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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