STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NIY0_GASACAT rich interactive domain 4A (RBP1-like). (1231 aa)    
Predicted Functional Partners:
G3P6G7_GASAC
Actin-like 6A; Belongs to the actin family.
   
 0.998
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.997
RBBP4-2
RB binding protein 4, chromatin remodeling factor.
   
 0.997
G3PNN8_GASAC
Retinoblastoma binding protein 4, like.
   
 0.997
G3Q0Q6_GASAC
Uncharacterized protein.
   
 0.997
G3QCA7_GASAC
Sap30-like.
    
 0.997
G3PMJ2_GASAC
SDS3 homolog, SIN3A corepressor complex component.
    
 0.995
G3NN24_GASAC
BRMS1 like transcriptional repressor b.
    
 0.994
G3PFW9_GASAC
Uncharacterized protein.
    
 0.994
G3Q893_GASAC
BRMS1 transcriptional repressor and anoikis regulator.
    
 0.994
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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