STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTK7Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family. (1053 aa)    
Predicted Functional Partners:
G3NHR1_GASAC
Uncharacterized protein.
    
 0.972
G3NTF8_GASAC
Hyaluronan binding protein 2.
    
 0.972
HGFAC
HGF activator.
    
 0.972
G3NB77_GASAC
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 3b.
    
 0.957
G3ND14_GASAC
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b.
    
 0.957
G3P094_GASAC
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a.
    
 0.957
G3PVZ0_GASAC
Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.
    
 0.957
G3N5Q3_GASAC
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades.
    
 0.913
G3NLI8_GASAC
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades.
    
 0.913
COL22A1
Collagen type XXII alpha 1 chain.
    
 0.901
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.