Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
PCDH17Protocadherin 17. (1011 aa)    
Predicted Functional Partners:
G3NJG9_GASAC
Potassium channel tetramerization domain containing 2.
    
 
 0.593
G3N910_GASAC
Ca2+-dependent activator protein for secretion b.
      
 0.552
G3NE82_GASAC
Potassium voltage-gated channel, subfamily G, member 3; Belongs to the potassium channel family.
      
 0.552
G3P5Q2_GASAC
Potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3b; Belongs to the potassium channel family.
      
 0.552
G3Q1M0_GASAC
Leucine rich repeat transmembrane neuronal 1.
      
 0.552
G3Q8E3_GASAC
Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs.
      
 0.541
BTBD1
BTB domain containing 1.
      
 0.483
G3PQK9_GASAC
Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.
      
 0.483
G3PRC3_GASAC
Basic leucine zipper nuclear factor 1.
      
 0.483
G3NW18_GASAC
Myosin IXAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
  0.477
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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