Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NJ36_GASACUncharacterized protein. (296 aa)    
Predicted Functional Partners:
G3PT97_GASAC
Ubiquitin carboxyl-terminal hydrolase.
    
   0.492
G3Q1D2_GASAC
F-box and WD repeat domain containing 11a.
    
 
 0.467
G3NNP8_GASAC
T-box transcription factor Tb.
    
 0.451
G3NXT1_GASAC
T-box transcription factor Ta.
    
 0.451
G3Q7M0_GASAC
REST corepressor 3.
    
 0.444
G3Q8J7_GASAC
REST corepressor 2.
    
 0.444
G3P1N5_GASAC
Trafficking regulator of GLUT4 (SLC2A4) 1a.
    
 
 0.443
G3Q5U3_GASAC
Ventral anterior homeobox 2.
      
 0.439
G3NM39_GASAC
Uncharacterized protein.
    
   0.419
G3NNJ1_GASAC
TLE family member 3, transcriptional corepressor.
    
   0.419
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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