Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
G3NJ48_GASACSeryl-tRNA synthetase. (515 aa)    
Predicted Functional Partners:
G3NA74_GASAC
Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.
    
 
 0.978
G3P140_GASAC
Tyrosine--tRNA ligase.
  
  
 0.959
G3NGQ4_GASAC
Glycyl-tRNA synthetase.
   
  
 0.937
WARS
Tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.924
G3QBC4_GASAC
SPT20 homolog, SAGA complex component.
    
 
 0.918
G3NT44_GASAC
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
   
 
 0.915
G3PD40_GASAC
SPT3 homolog, SAGA and STAGA complex component.
    
 
 0.914
G3PRW8_GASAC
Transcription factor A, mitochondrial.
   
  
 0.910
G3NQS2_GASAC
Seryl-tRNA synthetase 2, mitochondrial.
  
  
 
0.908
G3PAX5_GASAC
Transcriptional adapter.
    
 
 0.903
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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