STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NJ48_GASACSeryl-tRNA synthetase. (515 aa)    
Predicted Functional Partners:
G3NGQ4_GASAC
Glycyl-tRNA synthetase.
   
  
 0.949
G3PD40_GASAC
SPT3 homolog, SAGA and STAGA complex component.
    
 
 0.935
G3QBC4_GASAC
SPT20 homolog, SAGA complex component.
    
 
 0.934
G3PAX5_GASAC
Transcriptional adapter.
    
 
 0.931
G3P140_GASAC
Tyrosine--tRNA ligase.
  
  
 0.927
G3PQA8_GASAC
SAGA complex associated factor 29.
    
 
 0.927
G3NT44_GASAC
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
   
 
 0.923
G3NAI4_GASAC
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 
 0.920
G3PLL3_GASAC
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 
 0.920
G3P607_GASAC
Transcriptional adaptor 3 (NGG1 homolog, yeast)-like.
    
 
 0.913
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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