STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NJ53_GASACMannose receptor, C type 1a. (1448 aa)    
Predicted Functional Partners:
G3P8A7_GASAC
Si:dkey-26c10.5.
   
0.810
G3PY44_GASAC
C-type lectin domain-containing protein.
   
 
0.756
COLEC10
Collectin subfamily member 10.
     
 0.692
G3P2Y9_GASAC
Collectin sub-family member 11.
     
0.692
G3NCE4_GASAC
Cadherin 31; Cadherins are calcium-dependent cell adhesion proteins.
    
 0.673
G3NNT0_GASAC
Tenascin C.
    
  0.659
G3NYT0_GASAC
Uncharacterized protein.
    
  0.659
G3P5I9_GASAC
Uncharacterized protein.
    
  0.659
G3PKN2_GASAC
Tenascin R (restrictin, janusin).
    
  0.659
G3PKN8_GASAC
Tenascin N.
    
  0.659
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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