Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NJ98_GASACDown-regulator of transcription 1. (176 aa)    
Predicted Functional Partners:
G3Q9A3_GASAC
DR1-associated protein 1 (negative cofactor 2 alpha).
   
 0.997
G3P607_GASAC
Transcriptional adaptor 3 (NGG1 homolog, yeast)-like.
    
 0.996
G3PAX5_GASAC
Transcriptional adapter.
    
 0.996
G3PBH0_GASAC
MAP3K12 binding inhibitory protein 1.
    
 0.996
G3PQH6_GASAC
YEATS domain containing 2.
    
 0.996
G3PQA8_GASAC
SAGA complex associated factor 29.
    
 0.995
G3Q8T7_GASAC
Lysine acetyltransferase 14.
   
 0.991
G3PW63_GASAC
Zinc finger, ZZ-type containing 3.
    
 0.988
G3PZR6_GASAC
Polymerase (DNA directed), epsilon 3 (p17 subunit).
   
 
 0.987
G3Q2D7_GASAC
WD repeat domain 5.
   
 0.979
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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