Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NJH3_GASACRNA binding motif protein 42. (403 aa)    
Predicted Functional Partners:
G3Q5Z9_GASAC
HAUS augmin-like complex, subunit 3.
   
 0.967
G3PCK2_GASAC
Uncharacterized protein.
    
 0.964
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
   
 0.961
G3QBE4_GASAC
HAUS augmin-like complex, subunit 1.
    
 0.952
G3P0T9_GASAC
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
   
  0.950
G3Q7V9_GASAC
Uncharacterized protein.
   
 0.940
G3Q7W2_GASAC
HAUS6_N domain-containing protein.
   
 0.940
G3PC51_GASAC
PRP31 pre-mRNA processing factor 31 homolog (yeast).
   
 0.937
G3NXK6_GASAC
Heterogeneous nuclear ribonucleoprotein K.
    
 
 0.933
G3PUV4_GASAC
Heterogeneous nuclear ribonucleoprotein K, like.
    
 
 0.933
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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