Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NJJ0_GASACTranscription factor 23. (49 aa)    
Predicted Functional Partners:
G3PIK8_GASAC
Folliculogenesis specific bHLH transcription factor.
    
 
 0.744
RBKS
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
      
 0.676
TCF4
Transcription factor 4.
    
 0.667
G3PGW1_GASAC
Transcription factor 3b.
    
 0.667
G3PRC8_GASAC
Transcription factor 3a.
    
 0.667
G3PTF9_GASAC
Transcription factor 12.
    
 0.667
G3PHP7_GASAC
BRISC and BRCA1 A complex member 2.
      
 0.637
G3P9H0_GASAC
Sorting nexin 17.
      
 0.615
G3NRW4_GASAC
BHLH domain-containing protein.
    
 0.594
G3PVT1_GASAC
PAT1 homolog 1, processing body mRNA decay factor.
      
 0.537
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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