STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NJJ7_GASACProtoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. (475 aa)    
Predicted Functional Partners:
G3N6B5_GASAC
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
  
 
 0.992
G3PMY2_GASAC
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
 
 0.990
ENDOV
Endonuclease V.
  
 
 0.987
G3P6U3_GASAC
Coproporphyrinogen oxidase.
  
 
 0.949
G3NDH0_GASAC
Ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.929
G3P7J4_GASAC
Farnesyl-diphosphate farnesyltransferase 1.
    
 0.892
G3Q0Q2_GASAC
NADH:ubiquinone oxidoreductase complex assembly factor 6.
    
 0.892
G3P6H5_GASAC
Renalase, FAD-dependent amine oxidase.
     
 0.889
G3NDM0_GASAC
Uroporphyrinogen III synthase.
  
 
 0.886
G3NVL3_GASAC
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
    
  0.874
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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