Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NJK2_GASACStructural maintenance of chromosomes flexible hinge domain containing 1. (1355 aa)    
Predicted Functional Partners:
G3NJJ1_GASAC
Uncharacterized protein.
 
     0.944
G3Q4L1_GASAC
Uncharacterized protein.
    
   0.845
G3NDH4_GASAC
NudC domain containing 1.
    
   0.821
G3PEK6_GASAC
Asparaginyl-tRNA synthetase 2, mitochondrial.
    
   0.727
G3Q7D9_GASAC
Uncharacterized protein.
   
    0.691
G3NJI6_GASAC
Methyltransferase like 4; Belongs to the MT-A70-like family.
   
  
 0.689
WARS
Tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
   0.677
G3PBK8_GASAC
Tumor susceptibility 101a.
    
   0.674
G3PGE1_GASAC
Collagen, type VI, alpha 1.
    
 
 0.663
G3PNT4_GASAC
Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes.
    
 
 0.662
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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