STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NJL7_GASACRNA binding motif protein 12. (922 aa)    
Predicted Functional Partners:
G3PK47_GASAC
UBX domain protein 7.
   
  0.564
G3N856_GASAC
Uncharacterized protein.
    
  0.561
G3NHN2_GASAC
Ciliary rootlet coiled-coil, rootletin family member 2.
    
  0.561
G3NRV9_GASAC
SID1 transmembrane family, member 2.
    
  0.561
G3PFB6_GASAC
Trinucleotide repeat containing adaptor 6C1.
    
  0.561
G3PMS9_GASAC
Trinucleotide repeat containing adaptor 6A.
    
  0.561
G3Q6T9_GASAC
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.561
G3Q6Y5_GASAC
Trinucleotide repeat containing adaptor 6C2.
    
  0.561
G3NF91_GASAC
RAD23 homolog A, nucleotide excision repair protein b.
    
 0.537
G3NQE8_GASAC
Ubiquitin-like domain-containing protein.
    
 0.537
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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