Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NJM9_GASACCaldesmon 1b. (515 aa)    
Predicted Functional Partners:
G3NSA9_GASAC
Leiomodin 1b (smooth muscle).
     
 0.640
G3NRQ7_GASAC
NME/NM23 family member 8; Belongs to the NDK family.
   
 0.621
G3Q845_GASAC
Guanylate kinase-like domain-containing protein.
   
  0.593
RANBP2
RAN binding protein 2.
   
 0.577
G3P322_GASAC
WD repeat domain 90.
    
 0.572
G3P1B0_GASAC
Uncharacterized protein.
    
 0.549
MYL2
Myosin, light chain 2b, regulatory, cardiac, slow.
    
 0.549
G3Q830_GASAC
Uncharacterized protein.
      
 0.542
G3PKG3_GASAC
Cyclin G associated kinase.
   
 0.540
MYL12B
Myosin light chain 12B.
   
 0.539
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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