STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NJS6_GASACLysosomal trafficking regulator. (3760 aa)    
Predicted Functional Partners:
G3NN72_GASAC
Sphingomyelin phosphodiesterase 2b, neutral membrane (neutral sphingomyelinase).
     
 0.769
G3Q227_GASAC
Receptor for activated C kinase 1.
    
 0.719
G3PV31_GASAC
Sequestosome 1.
   
 
 0.683
G3PD02_GASAC
Uncharacterized protein.
    
 0.676
G3PD12_GASAC
Pleckstrin homology domain containing, family G (with RhoGef domain) member 7.
    
 0.676
G3P793_GASAC
DH domain-containing protein.
    
 0.667
G3PB03_GASAC
Pleckstrin homology domain containing, family G (with RhoGef domain) member 5b.
    
 0.667
G3P7A3_GASAC
Tumor necrosis factor receptor superfamily, member 1a.
    
 0.665
G3NKN2_GASAC
Ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase).
     
 0.654
G3NEY6_GASAC
Rabenosyn, RAB effector.
     
 0.646
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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